CNVScope (version 2.9.2)

importBreakpointBed: Import a breakpoint BED file.

Description

Imports a BED file with breakpoints or other interactions, in a dual position format.

Arguments

breakpoint_fn

the filename of the breakpoint bed file

Value

a Genomic Interactions Object

Examples

# NOT RUN {
importBreakpointBed(breakpoint_fn = system.file("extdata",
"sample_breakpoints.bed",package = "CNVScope"))
closeAllConnections()
# }