getProbs

getProbs.cghCall

getProbs.cnv

This function creates a list where each component correspond to a given probe. 
 Any component contains the posterior probabilities obtained from CGHcall algorithm.

utilities

This package carries out association analysis of common
        copy number variants in population-based studies. This package
        includes functions for analysing association under a series of
        study designs (case-control, cohort, etc), using several
        dependent variables (class status, censored data, counts) as
        response, adjusting for covariates and considering various
        inheritance models. It also includes functions for inferring
        copy number (CNV genotype calling).  Various classes and
        methods for generic functions (print, summary, plot, anova, ...
        ) have been created to facilitate the analysis.

getProbs: Get posterior probabilities from an object of class 'cnv' or 'CGHcall'

Description

Usage

Arguments

Value