subset.COMPASSContainer

A logical expression, evaluated within the metadata,
indicating which entries to keep.

subset

other arguments passed to 'COMPASSContainer' call.


Use this function to subset a <code>COMPASSContainer</code>.


COMPASS is a statistical framework that enables unbiased analysis
of antigen-specific T-cell subsets. COMPASS uses a Bayesian hierarchical
framework to model all observed cell-subsets and select the most likely
to be antigen-specific while regularizing the small cell counts that often
arise in multi-parameter space. The model provides a posterior probability
of specificity for each cell subset and each sample, which can be used to
profile a subject's immune response to external stimuli such as infection
or vaccination.

Greg Finak

COMPASS

Combinatorial Polyfunctionality Analysis of Single Cells

subset.COMPASSContainer function

Use this function to subset a <code>COMPASSContainer</code>.

subset.COMPASSContainer: Subset a COMPASSContainer

Description

Usage

Arguments

Examples