comp.igr.transc.levels: Compile the transcription levels for the intergenic regions.
Description
Internal function to quantify expression at the intergenic-level.
Usage
comp.igr.transc.levels(genes, igrs, cd, transcCDSs, str = "+")
Arguments
genes
Data table containing gene annotations.
cd
Data table containing the coverage depth of an RNA-seq expression profile(s).
transcCDSs
Transcription levels for the coding regions.
str
Charcater value indicating the strand. Defauls value is "+".
genes
Data tbale containing intergenic region annotations.