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CONFESS (version 1.0.2)

boxFluo: boxFluo

Description

It generates the density plots of the uncorrected and corrected cell fluorescence signals.

Usage

boxFluo(data, transformation, reference, legends, batchnames, image.type, savePlot)

Arguments

data
List. A list with the fluorescence data. Typically, the output of createFluo().
reference
Integer. The run number to be used as baseline for the run correction.
legends
Character vector. Puts the "uncorrected" or "corrected" legends on the signal density plots.
batchnames
original run name.
image.type
Character string. A triplet of IDs to characterize the type of images under study.
savePlot
Character. A switch to generate the density plots.
transform
Character string. The type of transformation to be performed. One of "bc" (Box-Cox), "log", "log10" or "asinh".

Value

The density plots of the fluorescence data