A helper that estimates the change-points by various methods.
Usage
cutpointsEstimator(data, thresh, cmethod, sig.level, Q, seed)
Arguments
data
List. A list of adjusted fluorescence signals for both channels.
thresh
Integer. The minimum number of values for a cluster re-estimated by the
change-point analysis.
cmethod
Character string. The change point method to be used. It can be one of "ECP",
(non-parametric) "manualECP" (non-parametric with user-defined numner of change-points) or
"PELT" (Pruned Exact Linear Time; parametric).
sig.level
Float. The significance level below which we do not reject a change point.
Q
Integer. The number of change-points to be kept if CPmethod = "manualECP".
seed
Integer. An optional seed number for the Random Number Generator.
Value
The sorted transformed signal differences (path) and the associated change-points