CORE (version 3.2)

testInputCORE: A table of DNA copy number gain events observed in 100 individual tumor cells

Description

Each observation in the table corresponds to a DNA copy number gain event in one of 100 individual breast cancer cells. The entire length of the genome was divided into 50009 bins. An event is an interval in chromosome chrom whose start and end bin numbers are given by start and end.

Usage

data(testInputCORE)

Format

A data frame with 2490 observations on the following 3 variables.

chrom

a numeric vector

start

a numeric vector

end

a numeric vector

References

Navin N, Kendall J, Troge J, Andrews P, Rodgers L, McIndoo J, Cook K, Stepansky A, Levy D, Esposito D et al. 2011. Tumour evolution inferred by single-cell sequencing. Nature 472(7341): 90-U119.

Examples

# NOT RUN {
data(testInputCORE)
## maybe str(testInputCORE) ; plot(testInputCORE) ...
# }