getRMSE

vector of observed class labels (0/1)

actual

vector of uncalibrated predictions

predicted

calculates the root of mean square error (RMSE) in the test set of calibrated predictions

Transforms your uncalibrated Machine Learning scores to well-calibrated prediction estimates that can be interpreted as probability estimates. The implemented BBQ (Bayes Binning in Quantiles) model is taken from Naeini (2015, ISBN:0-262-51129-0). Please cite this paper: Schwarz J and Heider D, Bioinformatics 2019, 35(14):2458-2465.

getRMSE: getRMSE

Description

Usage

Arguments

Value