capture_hardware

Capture hardware specifications including CPU, RAM, and GPU information.
Useful for documenting computational resources used in analysis.

A comprehensive reproducibility framework designed for R and bioinformatics
workflows. Automatically captures the entire analysis environment including R session
info, package versions, external tool versions ('Samtools', 'STAR', 'BWA', etc.), 'conda'
environments, reference genomes, data provenance with smart checksumming for large files,
parameter choices, random seeds, and hardware specifications. Generates executable scripts
with 'Docker', 'Singularity', and 'renv' configurations. Integrates with workflow managers
('Nextflow', 'Snakemake', 'WDL', 'CWL') to ensure complete reproducibility of computational
research workflows.

Abu SAADAT

Capsule

Comprehensive Reproducibility Framework for R and Bioinformatics
Analysis

capture_hardware function

<dl><dt>output_file</dt>
<dd>Character. Path to save hardware info. If NULL, returns as list.</dd></dl>

Arguments

Capture Hardware Information — capture_hardware

<dl>

<dt>output_file</dt>
<dd>Character. Path to save hardware info. If NULL, returns as list.</dd>

</dl>

capture_hardware: Capture Hardware Information

Description

Usage

Value

Arguments

Examples