analyze_network,network-method

analyze_network

analyze_network-methods

Calculates some indicators for each node in the network.

methods

A modeling tool allowing gene selection, reverse engineering, and prediction in cascade networks. Jung, N., Bertrand, F., Bahram, S., Vallat, L., and Maumy-Bertrand, M. (2014) <doi:10.1093/bioinformatics/btt705>.

Frederic Bertrand

Cascade

Selection, Reverse-Engineering and Prediction in Cascade
Networks

Myriam Maumy-Bertrand

Laurent Vallat

Nicolas Jung

analyze_network,network-method function

<dl><dt>Omega</dt>
<dd>a network object</dd>
<dt>nv</dt>
<dd>the level of cutoff at which the analysis should be done</dd>
<dt>label_v</dt>
<dd>(optionnal) the name of the genes</dd></dl>

Arguments

Nicolas Jung, Frédéric Bertrand , Myriam Maumy-Bertrand.

Author

Analysing the network — analyze_network,network-method

<dl>

<dt>Omega</dt>
<dd>a network object</dd>


<dt>nv</dt>
<dd>the level of cutoff at which the analysis should be done</dd>


<dt>label_v</dt>
<dd>(optionnal) the name of the genes</dd>

</dl>

analyze_network,network-method: Analysing the network

Description

Usage

Value

Arguments

Author

References

Examples