Category (version 2.38.0)

NewChrBandTree: Create a new ChrBandTree object

Description

NewChrBandTree and ChrBandTreeFromGraph provide constructors for the ChrBandTree class.

Usage

NewChrBandTree(chip, univ) ChrBandTreeFromGraph(g)

Arguments

chip
The name of an annotation data package
univ
A vector of gene identifiers that defines the universe of genes. Usually, this will be a vector of Entez Gene IDs. If univ is NULL, then all genes probed on the specified chip will be in the universe. We strongly recommend using the set of genes that remains after applying a non-specific filter as the universe.
g
A graph instance as returned by makeChrBandGraph

Value

A new ChrBandTree instance.

See Also

ChrBandTree-class