cutCNOlist

cnolist

model

cutTimeIndices

Set it to True to get the signals and cues not found in the model

verbose


The MIDAS file may contain species that are not contained in the model. If you
want to remove cues and signals from your CNOlist that are not contained in the
model, you can use this function by using the parameter model. 
It can also be used to remove some time points by using the parameter
cutTimeIndices. Both parameters can be used at the same time and at least one of
them must be provided.


This package does optimisation of boolean logic networks of signalling pathways based on a previous knowledge network and a set of data upon perturbation of the nodes in the network.

T Cokelaer

CellNOptR

Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data.

cutCNOlist function

The MIDAS file may contain species that are not contained in the model. If you
want to remove cues and signals from your CNOlist that are not contained in the
model, you can use this function by using the parameter model. 
It can also be used to remove some time points by using the parameter
cutTimeIndices. Both parameters can be used at the same time and at least one of
them must be provided.

cutCNOlist: Cut a CNOlist structure according to a model

Description

Usage

Arguments

Value

See Also