ChIPQC (version 1.8.2)

frip-methods: Retrieve fraction of reads in peaks

Description

Retrieve the fraction of reads in peaks

Methods

signature(object = "ChIPQCexperiment")

Retrieve a vector of values representing the proportion of reads that overlap peaks for each sample in an experiment.

signature(object = "ChIPQCsample")

Retrieve a value representing the proportion of reads that overlap the peaks for a sample.

See Also

ChIPQC-package, ChIPQCexperiment, ChIPQCsample

Examples

data(example_QCexperiment)
frip(exampleExp)
frip(QCsample(exampleExp,1))