ChIPQC (version 1.8.2)

plotCorHeatmap-methods: Generate Correlation Heatmap for ChIP samples

Description

Generates correlation heatmap for ChIP samples.

Methods

signature(object = "ChIPQCexperiment", attributes, ...)

Generate correlation heatmap, including clustering dendrogram, for all the samples in an experiment that are associated with a peakset.

attributes

character string, or vector of character strings, representing metadata field names, for use in labeling

...

additional parameters passed to dba.plotHeatmap

See Also

ChIPQC-package, ChIPQCexperiment, dba.plotHeatmap

Examples

data(tamoxifen_QC)
plotCorHeatmap(tamoxifen,attributes=c("Tissue","Condition","Replicate"))