egOrgMap


  The name of the organism annotation package or the species.


name


  Give a species name and return the organism annotation package name or 
  give an organism annotation package name then return the species name.


 misc 

The package includes functions to retrieve the sequences
around the peak, obtain enriched Gene Ontology (GO) terms, find
the nearest gene, exon, miRNA or custom features such as most
conserved elements and other transcription factor binding sites
supplied by users. Starting 2.0.5, new functions have been
added for finding the peaks with bi-directional promoters with
summary statistics (peaksNearBDP), for summarizing the
occurrence of motifs in peaks (summarizePatternInPeaks) and for
adding other IDs to annotated peaks or enrichedGO (addGeneIDs).
This package leverages the biomaRt, IRanges, Biostrings,
BSgenome, GO.db, multtest and stat packages.

egOrgMap: Convert between the name of the organism annotation package ("OrgDb") and the name of the organism.

Description

Usage

Arguments

Value

Examples