ChIPseeker (version 1.2.6)

plotAnnoPie.csAnno: plotAnnoPie

Description

pieplot from peak genomic annotation

Usage

plotAnnoPie.csAnno(x, ndigit = 2, cex = 0.9, col = NA, legend.position = "rightside", pie3D = FALSE, ...)

Arguments

x

csAnno object

ndigit

number of digit to round

cex

label cex

col

color

legend.position

topright or other.

pie3D

plot in 3D or not

...

extra parameter

Value

pie plot of peak genomic feature annotation

See Also

annotatePeak plotAnnoBar

Examples

## example not run
## require(TxDb.Hsapiens.UCSC.hg19.knownGene)
## txdb <- TxDb.Hsapiens.UCSC.hg19.knownGene
## peakfile <- system.file("extdata", "sample_peaks.txt", package="chipseeker")
## peakAnno <- annotatePeak(peakfile, TxDb=txdb)
## plotAnnoPie(peakAnno)