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ChemmineOB provides an R interface to a subset of cheminformatics functionalities implemented by the OpenBabel C++ project. OpenBabel is an open source cheminformatics toolbox that includes utilities for structure format interconversions, descriptor calculations, compound similarity searching and more. ChemineOB aims to make a subset of these utilities available from within R. For non-developers, ChemineOB is primarily intended to be used from ChemmineR as an add-on package rather than used directly.

ChemmineOB is hosted on Bioconductor where you can find the Release version and the Development version.

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Version

Version

1.10.2

License

file LICENSE

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Maintainer

Thomas Girke

Last Published

February 15th, 2017

Functions in ChemmineOB (1.10.2)

canonicalNumbering_OB

Canonical Numbering OB
convertFormat

Convert Formats
smartsSearch_OB

SMARTS Search
convertFormatFile

Convert Format of Files
exactMass_OB

Exact Mass (Monoisotopic Mass)
OB-classes

Classes from OB
prop_OB

Properties from OpenBabel
fingerprint_OB

Fingerprints from OpenBabel
forEachMol

For Each Mol