ClamR (version 2.1-3)

plotproxy.error: Plot Output Jack-Knife

Description

Plot output of proxyJK, the jackknife estimate of the time series analysis fitting curves.

Usage

plotproxy.error(x,y,gout, type=1, xlim=NULL, ylim=NULL, ylab="", xlab="", main="" )
plotproxy.all(gout, ylab1="", ylab2="",xlab="", main="",
xlim=NULL, ylim1=NULL, ylim2=NULL, legposition="topleft",
YAXstyle=0, pbox=TRUE,
legnames  = c('Phs', 'Pos', 'Amp', 'Prd')  )
plotproxy1(x, y, gout, xlim = NULL, ylim = NULL, ylab = "", xlab = "",
main = "")
plotproxy.error11(x, y, gout, type = 1, xlim = NULL,
ylim = NULL, ylab = "", xlab = "", main = "")
plotproxy.all2(gout, ylab1 = "", ylab2 = "", xlab = "", main = "",
xlim = NULL, ylim1 = NULL, ylim2 = NULL,
 legposition = "topleft", YAXstyle = 0,
pbox = TRUE, legnames = c("Phs", "Pos", "Amp",
 "Prd"))

Value

graphical side effects

Arguments

x

original x values from file

y

original y values from file

gout

output of proxyJK

type

type of error bar plotting: 1 = bars, 2=shaded

xlim

2-vector(limit on x-axis)

ylim

2-vector(limit on xy-axis)

ylim1

2-vector(limit on xy-axis)

ylim2

2-vector(limit on xy-axis)

ylab

character, y-axis label

ylab1

character, y-axis label

ylab2

character, y-axis label

xlab

character, x-axis label

main

character, title label

legposition

legend position

YAXstyle

Style for Y-axis

pbox

logical

legnames

names for legend

Author

Jonathan M. Lees<[e-mail]>

Details

Takes output directly from program

References

Wang, T., Surge, D., and Lees, J. M., (2015) ClamR: A Statistical Evaluation of Isotopic and Temperature Records in Sclerochronologic Studies. Palaeogeography, Palaeoclimatology, Palaeoecology, doi:10.1016/j.palaeo.2015.07.008.

See Also

proxyJK

Examples

if (FALSE) {
##  example to read in your data from csv file (for non ClamR data

## fn = "donna_viking_1.csv"
## C1 = scan(file=fn, what=list(mm="", o18=""), sep=",")
## x = as.numeric(C1$mm)
## y = as.numeric(C1$o18)
## x = x[!is.na(y)]
## y = y[!is.na(y)]


data(CLAM1)

x = CLAM1$x
y = CLAM1$y

dx = 3.392

gout = proxyJK(x, y, dx)

plotproxy1(x,y,gout)

}