SelectResult

SelectResult-class

SelectResult,character,character,list,list-method

show,SelectResult-method


  Contains the ranked indices or names of features, from most discriminative to least discriminative and a list
  of indicies of feature selected for use in classification. This class is not intended to be created by
  the user, but could be used in another package.


The software formalises a framework for classification in R.
There are four stages; Data transformation, feature selection, classifier training,
and prediction. The requirements of variable types and names are
fixed, but specialised variables for functions can also be provided.
The classification framework is wrapped in a driver loop, that
reproducibly carries out a number of cross-validation schemes.
Functions for differential expression, differential variability,
and differential distribution are included. Additional functions
may be developed by the user, by creating an interface to the framework.

Dario Strbenac

ClassifyR

A framework for two-class classification problems, with
applications to differential variability and differential
distribution testing

SelectResult function

<dl>
    <dt></dt><dd>
      <code>SelectResult(datasetName, selectionName, rankedFeatures, chosenFeatures</code></dd> </dl> <dl>
            <dt><code>datasetName</code></dt><dd>A name associated with the dataset used.</dd> <dt><code>selectionName</code></dt><dd>A name associated with the classification.</dd> <dt><code>rankedFeatures</code></dt><dd>Indices or names of all features, from most to least
                                         discriminative.</dd> <dt><code>chosenFeatures</code></dt><dd>Indices or names of features selected at each fold.</dd> </dl> 

Constructor

A method which summarises the results is available.
  <code>result</code> is a <code>SelectResult</code> object. <dl>
    <dt></dt><dd>
      <code>show(result)</code>Prints a short summary of what <code>result</code> contains.
    </dd>
</dl> 

Summary

A method which summarises the results is available.
  <code>result</code> is a <code>SelectResult</code> object.

  [object Object]

Contains the ranked indices or names of features, from most discriminative to least discriminative and a list
  of indicies of feature selected for use in classification. This class is not intended to be created by
  the user, but could be used in another package.

SelectResult: Container for Storing Feature Selection Results

Description

Arguments

Constructor

Summary

Examples