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CloneSeeker (version 1.0.10)

Seeking and Finding Clones in Copy Number and Sequencing Data

Description

Defines the classes and functions used to simulate and to analyze data sets describing copy number variants and, optionally, sequencing mutations in order to detect clonal subsets. See Zucker et al. (2019) .

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Install

install.packages('CloneSeeker')

Monthly Downloads

367

Version

1.0.10

License

Apache License (== 2.0)

Maintainer

Kevin Coombes

Last Published

April 27th, 2020

Functions in CloneSeeker (1.0.10)

Seeking Clones

Seeking Tumor Clones From Data
Simplices

Simplices and Clonal Fractions
WeightVector-class

Class "WeightVector"
Simulating Clones

Simulating Tumor Clones
Tumor-class

Class "Tumor"