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CloneSeeker (version 1.0.16)

Seeking and Finding Clones in Copy Number and Sequencing Data

Description

Defines the classes and functions used to simulate and to analyze data sets describing copy number variants and, optionally, sequencing mutations in order to detect clonal subsets. See Zucker et al. (2019) .

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Install

install.packages('CloneSeeker')

Monthly Downloads

187

Version

1.0.16

License

Apache License (== 2.0)

Maintainer

Kevin Coombes

Last Published

February 10th, 2026

Functions in CloneSeeker (1.0.16)

Simplices

Simplices and Clonal Fractions
Seeking Clones

Seeking Tumor Clones From Data
Simulating Clones

Simulating Tumor Clones
WeightVector-class

Class "WeightVector"
Tumor-class

Class "Tumor"