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ClusBoot (version 1.2.2)

Bootstrap a Clustering Solution to Establish the Stability of the Clusters

Description

Providing a cluster allocation for n samples, either with an $n \times p$ data matrix or an $n \times n$ distance matrix, a bootstrap procedure is performed. The proportion of bootstrap replicates where a pair of samples cluster in the same cluster indicates who tightly the samples in a particular cluster clusters together.

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Version

Install

install.packages('ClusBoot')

Monthly Downloads

255

Version

1.2.2

License

MIT + file LICENSE

Maintainer

Sugnet Lubbe

Last Published

July 8th, 2024

Functions in ClusBoot (1.2.2)

boot.proportions

Heatmap of the proportion of bootstrap replicates where objects cluster together
complete.linkage

Wrapper function for performing complete linkage clustering
plot.clusboot

MDS plot of similarities given by the proportion of bootstrap replicates where objects cluster together
calc.silhouette

Computes the silhouette vales based on proportion of times items cluster together
clusboot

Performs bootstrap on a cluster analysis output
fpc.clusterboot

Resampling according to the methods discussed in Hennig (2007)
case.study.psychiatrist

Patient by psychiatric symptom data
boot.silhouette

Produces silhouette plots