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CoDiNA (version 1.1.2)

Co-Expression Differential Network Analysis

Description

Categorize links and nodes from multiple networks in 3 categories: Common links (alpha) specific links (gamma), and different links (beta). Also categorizes the links into sub-categories and groups. The package includes a visualization tool for the networks. More information about the methodology can be found at: Gysi et. al., 2018 .

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Version

Install

install.packages('CoDiNA')

Monthly Downloads

310

Version

1.1.2

License

GPL-2

Maintainer

Deisy Gysi

Last Published

July 15th, 2020

Functions in CoDiNA (1.1.2)

GLI

GLI
ClusterNodes

ClusterNodes
MakeDiffNet

MakeDiffNet
OrderNames

OrderNames
OLI

OLI
CreateFullBase

CreateFullBase
PhiCategory

PhiCategory
CTR

CTR
summary.CoDiNA

summary.CoDiNA
AST

AST
Categorize

Categorize
normalize

normalize
as.igraph

as.igraph
plot.CoDiNA

plot.CoDiNA
print.CoDiNA

print.CoDiNA
.Random.seed

.Random.seed
Recode

Title Recode