plotDiag

list returned by gapsRun, gapsMapRun, or CoGAPS

gapsRes


<code>plotDiag</code> plots a series of diagnostic plots


Coordinated Gene Activity in Pattern Sets (CoGAPS)
implements a Bayesian MCMC matrix factorization algorithm,
GAPS, and links it to gene set statistic methods to infer biological
process activity.  It can be used to perform sparse matrix factorization on
any data, and when this data represents biomolecules, to do gene set
analysis.

Elana J Fertig

CoGAPS

Coordinated Gene Activity in Pattern Sets

plotDiag function

<code>plotDiag</code> plots a series of diagnostic plots

plotDiag: `plotDiag` plots a series of diagnostic plots

Description

Usage

Arguments