reorderByPatternMatch

Pattern matrix for which rows will be arranged to match the matrix in matchTo

matchTo

Matches two sets of pattern matrices (of the same size) found with CoGAPS.  Matches are identified by finding identifying subsequently decreasing correlations between patterns in the respective matrices.

Coordinated Gene Activity in Pattern Sets (CoGAPS)
implements a Bayesian MCMC matrix factorization algorithm,
GAPS, and links it to gene set statistic methods to infer biological
process activity.  It can be used to perform sparse matrix factorization on
any data, and when this data represents biomolecules, to do gene set
analysis.

reorderByPatternMatch: Match two sets of patterns found with CoGAPS

Description

Usage

Arguments

Value