{"Package":"CoNI","Type":"Package","Title":"Correlation Guided Network Integration (CoNI)","Version":"0.1.0","Date":"2021-09-28","Authors@R":"c(person(given = \"Jos Manuel\",\nfamily = \"Monroy Kuhn\",\nemail = \"nolozz@gmail.com\",\nrole = c(\"aut\", \"cre\")),\nperson(given = \"Dominik\",\nfamily = \"Lutter\",\nemail = \"dominik.lutter@helmholtz-muenchen.de\",\nrole = c(\"ths\")),\nperson(given = \"Valentina\",\nfamily = \"Klaus\",\nrole = c(\"ctb\")))","Description":"Integrates two numerical omics data sets from the same samples using partial correlations. The output can be represented as a network, bipartite graph or a hypergraph structure. The method used in the package refers to Klaus et al (2021) .","License":"GPL-3","Encoding":"UTF-8","LazyData":"true","Depends":"R (>= 4.0)","RoxygenNote":"7.1.1","Imports":"igraph (>= 1.2.6), doParallel (>= 1.0.16), cocor (>= 1.1.3),\nggplot2 (>= 3.3.3), forcats (>= 0.5.1), dplyr (>= 1.0.5),\ndata.table (>= 1.13.7), tibble (>= 3.1.0), foreach (>= 1.5.1),\ngenefilter (>= 1.72.1), ggrepel (>= 0.9.1), gplots (>= 3.1.1),\ngridExtra (>= 2.3), plyr (>= 1.8.6), ppcor (>= 1.1), tidyr (>=\n1.1.3), Hmisc (>= 4.4.2), methods (>= 4.0.3), rlang (>=\n0.4.10), tidyselect (>= 1.1.0)","Suggests":"kableExtra (>= 1.3.2), knitr (>= 1.31), rmarkdown (>= 2.6)","VignetteBuilder":"knitr","SystemRequirements":"python3","NeedsCompilation":"no","Packaged":"2021-09-29 16:18:07 UTC; manuel.kuhn","Author":"Jos Manuel Monroy Kuhn [aut, cre],\nDominik Lutter [ths],\nValentina Klaus [ctb]","Maintainer":"Jos Manuel Monroy Kuhn ","Repository":"CRAN","Date/Publication":"2021-09-30 09:10:02 UTC","repoType":"cran","tarballUrl":"ftp://cran.r-project.org/pub/R/src/contrib/CoNI_0.1.0.tar.gz","jsonAuthors":[{"name":"Jos Manuel Monroy Kuhn","email":"nolozz@gmail.com","maintainer":true},{"name":"Dominik Lutter","email":"dominik.lutter@helmholtz-muenchen.de","maintainer":false},{"name":"Valentina Klaus","email":null,"maintainer":false}],"readme":"","jobInfo":{"package":"CoNI","version":"0.1.0","parsingStatus":"success","parserVersion":1,"parsedAt":"2021-09-30T11:29:48+0000"}}

Description

Arguments

References