CoNI (version 0.1.0)

Compare_VertexClasses_sharedEdgeFeatures: Table VertexClass pairs of shared Edge Features

Description

Compare VertexClass pairs of the shared Edge Features of two treatments (e.g., lipid-class-pairs per shared gene)

Usage

Compare_VertexClasses_sharedEdgeFeatures(
  Treat1_path,
  Treat2_path,
  OutputName = "Shared_Genes_and_Edges_Treat1vsTreat2.csv",
  Treat1Name = "Treat1",
  Treat2Name = "Treat2"
)

Arguments

Treat1_path

TableForNetwork_file (file generated by CoNI) with path of Treatment 1

Treat2_path

TableForNetwork_file (file generated by CoNI) with path of Treatment 2

OutputName

Output file name with path

Treat1Name

Name of treatment one, default Treat1

Treat2Name

Name of treatment one, default Treat2

Value

A data.frame with all possible vertex-class pairs and their numbers per edge-feature and treatment.

Examples

# NOT RUN {
#For an example see the vignette
# }