createCohortSubsetDefinition

Create subset definition from subset objects

Generate cohorts and subsets using an Observational
Medical Outcomes Partnership (OMOP) Common Data Model (CDM) Database.
Cohorts are defined using 'CIRCE' (<https://github.com/ohdsi/circe-be>) or
SQL compatible with 'SqlRender' (<https://github.com/OHDSI/SqlRender>).

Anthony Sena

CohortGenerator

Cohort Generation for the OMOP Common Data Model

Jamie Gilbert

Gowtham Rao

Freddy Avila Cruz

Martijn Schuemie

Observational Health Data Science and Informatics 

createCohortSubsetDefinition function

<dl><dt>name</dt>
<dd>Name of definition</dd>
<dt>definitionId</dt>
<dd>Definition identifier</dd>
<dt>subsetOperators</dt>
<dd>list of subsetOperator instances to apply</dd>
<dt>identifierExpression</dt>
<dd>Expression (or string that converts to expression) that returns an id for an output cohort
the default is dplyr::expr(targetId * 1000 + definitionId)</dd>
<dt>subsetCohortNameTemplate</dt>
<dd>SqlRender string template for formatting names of resulting subset cohorts
Can use the variables @baseCohortName and @subsetDefinitionName.
This is applied when adding the subset definition to a cohort definition set.</dd></dl>

Arguments

Create Subset Definition — createCohortSubsetDefinition

<dl>

<dt>name</dt>
<dd>Name of definition</dd>


<dt>definitionId</dt>
<dd>Definition identifier</dd>


<dt>subsetOperators</dt>
<dd>list of subsetOperator instances to apply</dd>


<dt>identifierExpression</dt>
<dd>Expression (or string that converts to expression) that returns an id for an output cohort
the default is dplyr::expr(targetId * 1000 + definitionId)</dd>


<dt>subsetCohortNameTemplate</dt>
<dd>SqlRender string template for formatting names of resulting subset cohorts
Can use the variables @baseCohortName and @subsetDefinitionName.
This is applied when adding the subset definition to a cohort definition set.</dd>

</dl>

createCohortSubsetDefinition: Create Subset Definition

Description

Usage

Arguments