bedcollr

bed filename, without the <code>.bed</code> extension.

bfile

nshift_min

nshift_max


This is a wrapper around the <code>bedcoll</code> commandline tool.


Implements a generalized version of the CDH test (<DOI:10.1371/journal.pone.0028145> and <DOI:10.1186/s12859-016-1006-9>)
for detecting compound heterozygosity on a
genome-wide level, due to usage of generalized linear models it allows flexible
analysis of binary and continuous traits with covariates.

bedcollr: Shift bed files

Description

Usage

Arguments