CollapsABEL (version 0.10.11)

contrastPlot: Produce contrast Manhattan plot

Description

Overlays p-values from single-SNP method and GCDH.

Usage

contrastPlot(chr, bp, p, gcdh_p, snp, ...)

Arguments

chr
integer. Chromosome vector.
bp
integer. Position vector.
p
numeric. P-value vector.
gcdh_p
numeric. GCDH p-value vector.
snp
character. SNP name vector.
...
passed to manhattanPlot

Value

ggplot object.