CollapsABEL (version 0.10.11)

plInfo: Constructor for PlInfoC class

Description

Populates an PlInfoC object from a given plink bed filename stem (i.e. exclude extension name)

Usage

plInfo(pl_info, bedstem, db_setup)
"plInfo"(pl_info, bedstem, db_setup)
"plInfo"(pl_info, bedstem, db_setup)
"plInfo"(pl_info, bedstem, db_setup)
"plInfo"(pl_info, bedstem, db_setup)

Arguments

pl_info

a PlInfoC object, possibly empty.

bedstem

path of bed file excluding extension name

db_setup

logical. Whether to setup SQLite database for .bim, .fam and .frq files.

Value

a PlInfoC object

Examples

## Not run: 
# 		pl_info = plInfo(.PlInfoC(), "mmp13", db_setup = TRUE)
# 		isSetup(pl_info)
# 		bim_ff = getQuery(sqliteFilePl(pl_info), "select * from bim")
# 		fam_ff = getQuery(sqliteFilePl(pl_info), "select * from fam")
# 		frq_ff = getQuery(sqliteFilePl(pl_info), "select * from frq")
# ## End(Not run)