readGwasOut

pl_gwas

cn_select

Logical. Whether to remove GWAS output files after finished reading them. Default to TRUE.

rmGwasOut


Read GWAS output from plink
If the GWAS is finished, returns a data.frame, 
otherwise returns NULL.


Implements a generalized version of the CDH test (<DOI:10.1371/journal.pone.0028145> and <DOI:10.1186/s12859-016-1006-9>)
for detecting compound heterozygosity on a
genome-wide level, due to usage of generalized linear models it allows flexible
analysis of binary and continuous traits with covariates.

readGwasOut: Read GWAS output from plink If the GWAS is finished, returns a data.frame, otherwise returns NULL.

Description

Usage

Arguments

Value