find_start_temp

Description of the starting temperature function.

Analysis of network community objects with applications to neuroimaging data. There are two main components to this package. The first is the hierarchical multimodal spinglass (HMS) algorithm, which is a novel community detection algorithm specifically tailored to the unique issues within brain connectivity. The other is a suite of semiparametric kernel machine methods that allow for statistical inference to be performed to test for potential associations between these community structures and an outcome of interest (binary or continuous).

Alexandria Jensen

CommKern

Network-Based Communities and Kernel Machine Methods

Peter DeWitt

Debashis Ghosh

find_start_temp function

<dl><dt>net</dt>
<dd>a <code>spinglass_net</code> object</dd>
<dt>mod_matrix</dt>
<dd>mod_matrix</dd>
<dt>spins</dt>
<dd>spins</dd>
<dt>alpha</dt>
<dd>a double parameter balancing the use of the guidance matrix in modularity calculation</dd>
<dt>ts</dt>
<dd>the starting temperature for the search, set to 1 within the algorithm</dd></dl>

Arguments

Starting temperature — find_start_temp

<dl>

<dt>net</dt>
<dd>a <code>spinglass_net</code> object</dd>


<dt>mod_matrix</dt>
<dd>mod_matrix</dd>


<dt>spins</dt>
<dd>spins</dd>


<dt>alpha</dt>
<dd>a double parameter balancing the use of the guidance matrix in modularity calculation</dd>


<dt>ts</dt>
<dd>the starting temperature for the search, set to 1 within the algorithm</dd>

</dl>

find_start_temp: Starting temperature

Description

Usage

Value

Arguments

Details