CommT (version 0.1.1)

CommT.anova: Conduct ANOVA analysis on tree distance matrix

Description

Function to conduct an ANOVA analysis on the matrix of tree distances generated via function CommT.kfdist().

Usage

CommT.anova(in_df)

Arguments

in_df

a dataframe storing the tree distances inferred via function CommT.kfdist(). This dataframe constitutes a stacked list of distances grouped by genetic locus and is the default output of function CommT.kfdist()

Examples

  # Load libraries
  #  require(ape)

  # Load input data
    data(post_gt_distrs_BEAST)
    data(post_gt_distrs_starBEAST)

  # Calculate KF distances
    in_data = CommT.kfdist(post_gt_distrs_BEAST, post_gt_distrs_starBEAST)

  # Generate ANOVA legend
    legend_text = CommT.anova(in_data)