CoverageView-internal

.bed.to.GRanges

.gff.to.GRanges

.cov.bin

cov.bin

cov.bin-methods

cov.bin,ANY,missing,numeric,GRanges,missing-method

cov.bin,ANY,missing,numeric,missing,missing-method

cov.bin,ANY,numeric,missing,GRanges,missing-method

cov.bin,ANY,numeric,missing,missing,missing-method

cov.bin,missing,missing,missing,GRanges,character-method

cov.bin,missing,missing,missing,missing,character-method

cov.bin,ANY,missing,numeric,missing,CoverageBamFile,missing-method

cov.bin,ANY,missing,numeric,missing,CoverageBigWigFile,missing-method

cov.bin,ANY,numeric,missing,missing,CoverageBamFile,missing-method

cov.bin,ANY,numeric,missing,missing,CoverageBigWigFile,missing-method

cov.bin,missing,missing,missing,GRanges,missing,character-method

cov.bin,missing,missing,missing,missing,CoverageBamFile,character-method

.do.normalization

imageScale

 internal

This package provides a framework for the visualization of
genome coverage profiles. It can be used for ChIP-seq
experiments, but it can be also used for genome-wide nucleosome
positioning experiments or other experiment types where it is
important to have a framework in order to inspect how the
coverage distributed across the genome

CoverageView-internal: Internal Methods

Description

Arguments

Details