Covid19Wastewater (version 1.0.1)

OffsetDFMaker: Returns a dataframe with the multiple ways to analyze how offset the Wastewater is from cases data

Description

Returns a dataframe with the multiple ways to analyze how offset the Wastewater is from cases data

Usage

OffsetDFMaker(
  length,
  startdate,
  enddate,
  casesdf,
  wastedf,
  N1_column = N1,
  N2_column = N2,
  site_column = site,
  date_column = date,
  case_column = conf_case
)

Value

DF with the columns: number of days wastewater is offset, geo mean of(n1,n2) / confirmed cases,previous with rolling case average, MSE rolling average,Pearson correlation, Kendall correlation, Spearman correlation, R squared.

Arguments

length

The length of the time window for the results / 2

startdate

First day for both data sets

enddate

Last day for both data sets

casesdf

DF with case data columns needed(data,conf_case)

wastedf

DF with Wastewater data columns needed(date,N1,N2)

N1_column

name of N1 column

N2_column

name of N2 column

site_column

name of site column

date_column

name of date column

case_column

name of case column

Examples

data(WasteWater_data, package = "Covid19Wastewater")
data("Case_data", package = "Covid19Wastewater")
#Will output a df from -10 to +10 days using all of the data from 2020-08-01 to 2023-01-01
OffsetDFMaker(10,as.Date("2020-08-01"), as.Date("2023-01-01"), Case_data, WasteWater_data)