Coxmos (version 1.1.2)

getCutoffAutoKM.list: getCutoffAutoKM.list

Description

Run the function "getCutoffAutoKM" for a list of models. More information in "?getCutoffAutoKM".

Usage

getCutoffAutoKM.list(lst_results)

Value

A list where each element corresponds to the result of the getCutoffAutoKM function applied to each model in the input list. The structure and content of each element will be consistent with the output of the getCutoffAutoKM function.

Arguments

lst_results

List of lists. Result of getAutoKM.list() function.

Author

Pedro Salguero Garcia. Maintainer: [e-mail]

References

Kaplan_1958Coxmos

Examples

data("X_proteomic")
data("Y_proteomic")
set.seed(123)
index_train <- caret::createDataPartition(Y_proteomic$event, p = .5, list = FALSE, times = 1)
X_train <- X_proteomic[index_train,1:50]
Y_train <- Y_proteomic[index_train,]
X_test <- X_proteomic[-index_train,1:50]
Y_test <- Y_proteomic[-index_train,]
splsicox.model <- splsicox(X_train, Y_train, n.comp = 2, penalty = 0.5, x.center = TRUE,
x.scale = TRUE)
splsdrcox.model <- splsdrcox_penalty(X_train, Y_train, n.comp = 2, penalty = 0.5, x.center = TRUE,
x.scale = TRUE)
lst_models = list("sPLSICOX" = splsicox.model, "sPLSDRCOX" = splsdrcox.model)
lst_results = getAutoKM.list(type = "LP", lst_models)
getCutoffAutoKM.list(lst_results)