writeFastq

outf

A list containing entries named "seq" (sequence) and
"quals" (quality scores, in ASCII format)

vals

Should spaces in the sequence name be
substituted with underscores?  TRUE or FALSE

allow_spaces

Check whether reads with the same name already
exist in the output fastq.  (Default: TRUE)

check


Used by abifToFastq to write sanger sequences
to fastq format  As abifToFastq appends output to files,
writeFastq checks that sequence names are unique.  This
function is faster with checking switched off.


CrispRVariants provides tools for analysing the results of a
CRISPR-Cas9 mutagenesis sequencing experiment, or other sequencing experiments
where variants within a given region are of interest. These tools allow users to
localize variant allele combinations with respect to any genomic location (e.g.
the Cas9 cut site), plot allele combinations and calculate mutation rates with
flexible filtering of unrelated variants.

writeFastq: Append a sequence to a fastq file

Description

Usage

Arguments

Value