CytoProfile

CRAN Build Status:

Development Build Status:

The goal of CytoProfile is to conduct quality control using biological meaningful cutoff on raw measured values of cytokines. Specifically, test on distributional symmetry to suggest the adopt of transformation. Conduct exploratory analysis including summary statistics, generate enriched barplots, and boxplots. Further, conduct univariate analysis and multivariate analysis for advance analysis.

Installation

Before installation of the CytoProfile package, make sure to install BiocManager and mixOmics packages using:

## install BiocManager
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") 
## install mixOmics 
BiocManager::install('mixOmics')

You can install the development version of CytoProfile from GitHub with:

# install.packages("devtools")
devtools::install_github("saraswatsh/CytoProfile", ref = "devel")

Install CytoProfile from CRAN with:

install.packages("CytoProfile")

See change log for the latest updates and changes on release build at News and development build at News.

To look at the vignettes included in the package, use:

browseVignettes("CytoProfile")

Vignettes are also available on CytoProfile website to learn how to use the package.

For more details on the released build of the package, please visit the CytoProfile website. For the development version of the package, please visit the Development CytoProfile website.