pathsDefault

The paths are:
datasrc: [ROOT]/[sponsor]/[project]/[package]/raw/datasource
data: [ROOT]/[sponsor]/[project]/[package]/output/[taskname]
bin: [ROOT]/[sponsor]/[project]/[package]/output/[taskname]/bin
code: [ROOT]/[sponsor]/[project]/[package]/progs
doc: [ROOT]/[sponsor]/[project]/[package]/docs
log: [ROOT]/[sponsor]/[project]/[package]/output/log

Tools, methods and processes for the management
of analysis workflows. These lightweight solutions facilitate
structuring R&D activities. These solutions were developed to comply
with Good Documentation Practice (GDP),
with ALCOA+ principles as proposed by the U.S. FDA, and
with FAIR principles as discussed by Jacobsen et al. (2017) <doi:10.1162/dint_r_00024>.

Gregoire Thomas

D4TAlink.light

GDP - Workflow Management

pathsDefault function

<dl><dt>project</dt>
<dd>Project name.</dd>
<dt>package</dt>
<dd>Package name.</dd>
<dt>taskname</dt>
<dd>Task name.</dd>
<dt>sponsor</dt>
<dd>Sponsor name, default set by <code>setTaskSponsor</code>.</dd></dl>

Arguments

Task paths generator. — pathsDefault

<dl>

<dt>project</dt>
<dd>Project name.</dd>


<dt>package</dt>
<dd>Package name.</dd>


<dt>taskname</dt>
<dd>Task name.</dd>


<dt>sponsor</dt>
<dd>Sponsor name, default set by <code>setTaskSponsor</code>.</dd>

</dl>

pathsDefault: Task paths generator.

Description

Usage

Value

Arguments