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DBGSA (version 1.0)
methods of distance-based gene set functional enrichment analysis
Description
This package provides methods and examples to support a method of disease-based Gene Set Functional Enrichment Analysis (GSFEA).
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Version
1.2
1.1
1.0
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Install
install.packages('DBGSA')
Monthly Downloads
29
Version
1.0
License
GPL-3
Maintainer
Li Jin
Last Published
May 12th, 2011
Functions in DBGSA (1.0)
Search functions
functionall
P values of distance-based gene set enrichment analysis
b1
Gene set function expression profile
valuep
function which computes p values from different phenotypes by distance matrix
distable
function to compute the specific distances between different phenotypes
afExp
Gene expression profile
distance
distances between case and control group
avelinkdis
Computing the distance by group average method
DBGSA-package
methods of distance-based gene set functional enrichment analysis
randdis
Randomly generating some gene expression profiles by gene resampling
centdis
Computing the distance by gravity method
rand
distances of gene expression obtained by gene resampling