input_galonska


The matrix containes the whole cell extract (WCE) data for H3Kme3 
from the paper
in each of the four columns, since
this is the only inpu data provided for all 4 samples. For additional
information see the documentation
of <a rd-options="" href="/link/chip_galonska?package=DChIPRep&version=1.2.3" data-mini-rdoc="DChIPRep::chip_galonska">chip_galonska</a>.


datasets

The DChIPRep package implements a methodology to assess
differences between chromatin modification profiles in
replicated ChIP-Seq studies as described in Chabbert et. al -
http://www.dx.doi.org/10.15252/msb.20145776. A detailed description of
the method is given in the software paper at https://doi.org/10.7717/peerj.1981

Bernd Klaus

DChIPRep

DChIPRep - Analysis of chromatin modification ChIP-Seq data with
replication

input_galonska function

Format

The matrix containes the whole cell extract (WCE) data for H3Kme3 
from the paper
in each of the four columns, since
this is the only inpu data provided for all 4 samples. For additional
information see the documentation
of <a href="chip_galonska" rd-options="">chip_galonska</a>.

Another example Input data set that can be used 
with <code><a href="importDataFromMatrices" rd-options="">importDataFromMatrices</a></code> from rom Galonska et. al., 2015.

Another example Input data set that can be used 
with <code><a rd-options="" href="/link/importDataFromMatrices?package=DChIPRep&version=1.2.3" data-mini-rdoc="DChIPRep::importDataFromMatrices">importDataFromMatrices</a></code> from rom Galonska et. al., 2015.

input_galonska: Another example Input data set that can be used with `importDataFromMatrices` from rom Galonska et. al., 2015.

Description

Usage

Arguments

Value

Format

See Also