DEVis (version 1.0.1)

init_cutoffs: Initialize cutoff values for significance and fold-change filtering.

Description

This function initializes the p-value cutoffs and log2foldChange values for most visualizations, filtering, and aggregation steps of this package. Significant differentially expressed genes will be initially determined based on the provided p-value cutoff and filtering, when appropriate, will generally be based on the provided log fold-change cutoff initialized by this function.

Usage

init_cutoffs(p_signif = 0.05, lfc_cut = 1)

Arguments

p_signif

P-value cutoff for determining DE genes. Default: 0.05

lfc_cut

Log2 fold-change cutoff. Default: 1

Value

This function does not return a value.

Examples

# NOT RUN {
init_cutoffs(p_signif=0.01, lfc_cut=1.5)

# }