DGEAR (version 0.1.4)

perform_anova: Function for ANOVA One-Way Test

Description

Function for ANOVA One-Way Test

Usage

perform_anova(datafile, con, exp, alpha = 0.05)

Value

A data frame containing values for statistic score, p-values etc for each gene being tested.

Arguments

datafile

A matrix containing the gene expression data

con

A data frame or matrix containing the expression values for the control.

exp

A data frame or matrix containing the expression values for the experiment.

alpha

Value of significance level ranging from 0 to 1 (default = 0.05 states 5 % significance).

Examples

library(DGEAR)
data("gene_exp_data")
data = read_and_preprocess_data(datafile = gene_exp_data, con1=1,con2=10,exp1=11,exp2=20)
perform_anova(datafile = data$datafile, con= data$con, exp= data$exp)