It finds the vector of permutation to permute data by its largest absolute value in each eigenvector. It sets the order by specified number of factors, and the rest is ordered as they were. The data is permuted, and if needed, scaled.
permutation.scale(data, n.factors, return.scale = FALSE)
The permuted and standardized dataset, either in matrix or array.
The dataset
Number of factors
Scale data after permutation