inudge.qq.plot.internal

a number which is used to generate random sample of inudge model.

a list object returned by <code><a rd-options="" href="/link/inudge.fit?package=DIME&version=1.3.0" data-mini-rdoc="DIME::inudge.fit">inudge.fit</a></code> function.

Internal function needed to generate a QQ-plot for iNUDGE model. 
 <code>inudge.plot.qq</code>

internal

A robust identification of differential binding sites method for analyzing ChIP-seq (Chromatin Immunoprecipitation Sequencing)
comparing two samples that considers an ensemble of finite mixture models combined with a local false discovery rate (fdr)
allowing for flexible modeling of data. Methods for Differential Identification using Mixture Ensemble (DIME) is described in:
Taslim et al., (2011) <doi:10.1093/bioinformatics/btr165>.

Cenny Taslim

DIME

Differential Identification using Mixture Ensemble

inudge.qq.plot.internal function

<dl><dt>i</dt>
<dd>a number which is used to generate random sample of inudge model.</dd> <dt>obj</dt>
<dd>a list object returned by <code>inudge.fit</code> function.</dd></dl>

Arguments

Cenny Taslim <a href="/link/taslim.2%40osu.edu?package=DIME&version=1.3.0" data-mini-rdoc="DIME::taslim.2@osu.edu">taslim.2@osu.edu</a>, with contributions from Abbas Khalili
<a href="/link/khalili%40stat.ubc.ca?package=DIME&version=1.3.0" data-mini-rdoc="DIME::khalili@stat.ubc.ca">khalili@stat.ubc.ca</a>, Dustin Potter <a href="/link/potterdp%40gmail.com?package=DIME&version=1.3.0" data-mini-rdoc="DIME::potterdp@gmail.com">potterdp@gmail.com</a>, 
and Shili Lin <a href="/link/shili%40stat.osu.edu?package=DIME&version=1.3.0" data-mini-rdoc="DIME::shili@stat.osu.edu">shili@stat.osu.edu</a>

Author

Internal function for QQ-plot of iNUDGE model — inudge.qq.plot.internal

<dl>

<dt>i</dt>
<dd>a number which is used to generate random sample of inudge model.</dd>

 <dt>obj</dt>
<dd>a list object returned by <code>inudge.fit</code> function.</dd>

</dl>

Cenny Taslim <a href='mailto:taslim.2@osu.edu'>taslim.2@osu.edu</a>, with contributions from Abbas Khalili
<a href='mailto:khalili@stat.ubc.ca'>khalili@stat.ubc.ca</a>, Dustin Potter <a href='mailto:potterdp@gmail.com'>potterdp@gmail.com</a>, 
and Shili Lin <a href='mailto:shili@stat.osu.edu'>shili@stat.osu.edu</a>

inudge.qq.plot.internal: Internal function for QQ-plot of iNUDGE model

Description

Usage

Arguments

Author

See Also