DLMtool (version 4.4.1)

CalcOutput: Apply output control recommendations and calculate population dynamics

Description

Apply output control recommendations and calculate population dynamics

Usage

CalcOutput(y, TACused, TAC_f, lastCatch, availB, maxF, Biomass_P, VBiomass_P,
  CB_P, CB_Pret, FM_P, Z_P, Spat_targ, V_P, retA_P, M_ageArray, qs, nyears,
  nsim, maxage, nareas)

Arguments

y

Projection year

TACused

TAC recommendation

TAC_f

Implementation error on TAC

lastCatch

Catch from last year

availB

Total available biomass

maxF

Maximum fishing mortality

Biomass_P

Numeric array (nsim, maxage, proyears, nareas) with Biomass at age

VBiomass_P

Numeric array (nsim, maxage, proyears, nareas) with Vulnerable Biomass at age

CB_P

Numeric array (nsim, maxage, proyears, nareas) with Catch Biomass at age

CB_Pret

Numeric array (nsim, maxage, proyears, nareas) with Retained catch biomass at age

FM_P

Numeric array (nsim, maxage, proyears, nareas) with fishing mortality at age

Z_P

Numeric array (nsim, maxage, proyears, nareas) with total mortality at age

Spat_targ

Spatial targetting

V_P

Numeric array(nsim, maxage, nyears+proyears) with vulnerability at age

retA_P

Numeric array(nsim, maxage, nyears+proyears) with retention at age

M_ageArray

Numeric array (nsim, maxage, nyears+proyears) Natural mortality at age

qs

Catchability coefficient

nyears

Number of historical years

nsim

Number of simulations

maxage

Maximum age

nareas

Number of areas