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DNAmotif (version 0.1.1)

DNA Sequence Motifs

Description

Motifs within biological sequences show a significant role. This package utilizes a user-defined threshold value (window size and similarity) to create consensus segments or motifs through local alignment of dynamic programming with gap and it calculates the frequency of each identified motif, offering a detailed view of their prevalence within the dataset. It allows for thorough exploration and understanding of sequence patterns and their biological importance.

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Version

Install

install.packages('DNAmotif')

Monthly Downloads

137

Version

0.1.1

License

GPL-3

Maintainer

Subham Ghosh

Last Published

September 27th, 2024

Functions in DNAmotif (0.1.1)

DNAmotifs

Generation of motifs from DNA sequences