Mm.datamat


This matrix contains the RNA intensity values for each gene across each RNA fraction and their replicate measurements of the Mus Musculus DTA experiment from Doelken et al.


datasets

Dynamic Transcriptome Analysis (DTA) can monitor the cellular response to perturbations with higher sensitivity and temporal resolution than standard transcriptomics. The package implements the underlying kinetic modeling approach capable of the precise determination of synthesis- and decay rates from individual microarray or RNAseq measurements.

Bjoern Schwalb

Dynamic Transcriptome Analysis

Mm.datamat function

The column names of the matrix give the cel-file name and the row names the Ensembl gene IDs.

Format

Doelken, L., Ruzsics, Z., Raedle, B., Friedel, C. C., Zimmer, R., Mages, J., Hoffmann, R., Dickinson, P., Forster, T., Ghazal, P., & Koszinowski, U. H. (2008). High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay. RNA 14(9), 1959-1972.

Source

This matrix contains the RNA intensity values for each gene across each RNA fraction and their replicate measurements of the Mus Musculus DTA experiment from Doelken et al.

Mm.datamat: Gene expression profiles of the Mus Musculus DTA experiment from Doelken et al.

Description

Usage

Arguments

Format

Source