apply_procrustes

Procrustes alignment and mapping back to distances

Tools to simulate genetic distance matrices, align and compare them via
multidimensional scaling (MDS) and Procrustes, and evaluate imputation with
the Bootstrapping Evaluation for Structural Missingness Imputation (BESMI)
framework. Methods align with Zhu et al. (2025) <doi:10.3389/fpls.2025.1543956>
and the associated software resource Zhu (2025) <doi:10.26188/28602953>.

Jiashuai Zhu

DataFusionGDM

Machine Learning for Integrating Partially Overlapped Genetic
Datasets

The University of Melbourne 

Agriculture Victoria 

apply_procrustes function

<dl><dt>X_base</dt>
<dd>Base coordinates for target alignment</dd>
<dt>Y_base</dt>
<dd>Base coordinates for source alignment</dd>
<dt>Y</dt>
<dd>Full source coordinates to transform</dd></dl>

Arguments

Procrustes alignment and mapping back to distances — apply_procrustes

<dl>

<dt>X_base</dt>
<dd>Base coordinates for target alignment</dd>


<dt>Y_base</dt>
<dd>Base coordinates for source alignment</dd>


<dt>Y</dt>
<dd>Full source coordinates to transform</dd>

</dl>

apply_procrustes: Procrustes alignment and mapping back to distances

Description

Usage

Value

Arguments